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We're thrilled to announce the release of V-pipe 3.0! This computational pipeline is specifically crafted for analyzing short viral genomes using next-generation sequencing data. V-pipe 3.0 enables sustainable viral genomic data science. You can check out the published paper on our work in GigaScience at: https://doi.org/10.1093/gigascience/giae065

Our paper ‘Assessing different next-generation sequencing technologies for wastewater-based epidemiology’, is now published in Water Research. In this paper we identified tradeoffs in terms of cost, timeliness, and accuracy of wastewater pathogen tracking between different NGS technologies: https://www.sciencedirect.com/science/article/pii/S0043135424013642?via%3Dihub.