LIMEpi
Latent Interaction Modelling for Epistasis Detection
Current version
1.0 Dec 2013
Description
This is an R package that implements a two-stage epistasis detection procedure from genotype data, given a continuous phenotype. The first stage consists of SNP ranking and selection based on the SNP's potential to interact with a latent SNP-like variable.
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Authors and Contributors
Citation
- Latent epistatic interaction model identifies loci associated with human working memory
Janos Z Kelemen, Christian Vogler, Angela Beck, Dominique de Quervain, Andreas Papassotiropoulos and Niko Beerenwinkel
external page bioRxiv (2015)