V-pipe for analyzing SARS-CoV-2 sequencing data
We have released a new version of V-pipe, our bioinformatics pipeline for viral NGS data. The updated release is specifically adapted to analyse high-throughput sequencing data of SARS-CoV-2. It also integrates a new version of ShoRAH for SNV calling, and it supports reporting genetic variants in standard VCF files.
by
Fritz Bayer
A external pagenew tutorialcall_made demonstrates its use and simplified deployment with an installer. We are continuously improving V-pipe. Subscribe to our newsletter to be informed about future updates, or get in touch with us at .
The links:
[1] - https://cbg-ethz.github.io/V-pipe/sars-cov-2/
[2] - https://cbg-ethz.github.io/V-pipe/tutorial/sars-cov2/
[3] - https://sympa.ethz.ch/sympa/subscribe/v-pipe-users